A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv13151



Internal ID15832056
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:32529573..32537788hg38UCSC Ensembl
Outerchr6:32529168..32550816hg38UCSC Ensembl
Innerchr6:32497350..32505565hg19UCSC Ensembl
Outerchr6:32496945..32518593hg19UCSC Ensembl
Innerchr6:32605328..32613543hg18UCSC Ensembl
Outerchr6:32604923..32626571hg18UCSC Ensembl
Innerchr6:32605328..32613543hg17UCSC Ensembl
Outerchr6:32604923..32626571hg17UCSC Ensembl
Cytoband6p21.32
Allele length
AssemblyAllele length
hg3821649
hg1921649
hg1821649
hg1721649
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv7883
Supporting Variants
SamplesNA12872
Known GenesHLA-DRB5
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv13151
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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