A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv13145



Internal ID15482476
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr5:70541721..70541801hg38UCSC Ensembl
Outerchr5:70539543..70543453hg38UCSC Ensembl
Innerchr5:69837548..69837628hg19UCSC Ensembl
Outerchr5:69835370..69839280hg19UCSC Ensembl
Innerchr5:69873304..69873384hg18UCSC Ensembl
Outerchr5:69871126..69875036hg18UCSC Ensembl
Innerchr5:69873304..69873384hg17UCSC Ensembl
Outerchr5:69871126..69875036hg17UCSC Ensembl
Cytoband5q13.2
Allele length
AssemblyAllele length
hg383911
hg193911
hg183911
hg173911
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv10707
Supporting Variants
SamplesNA10847
Known GenesGUSBP9, SMA4, SMA5
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv13145
Frequency
Sample Size31
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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