A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv12900



Internal ID15843788
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr3:137890028..137925411hg38UCSC Ensembl
Outerchr3:137889437..137926094hg38UCSC Ensembl
Innerchr3:137608870..137644253hg19UCSC Ensembl
Outerchr3:137608279..137644936hg19UCSC Ensembl
Innerchr3:139091560..139126943hg18UCSC Ensembl
Outerchr3:139090969..139127626hg18UCSC Ensembl
Innerchr3:139091568..139126951hg17UCSC Ensembl
Outerchr3:139090977..139127634hg17UCSC Ensembl
Cytoband3q22.3
Allele length
AssemblyAllele length
hg3836658
hg1936658
hg1836658
hg1736658
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv10327
Supporting Variants
SamplesNA19221
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv12900
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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