A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv12861



Internal ID15837968
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr4:25500546..25504283hg38UCSC Ensembl
Outerchr4:25499757..25505116hg38UCSC Ensembl
Innerchr4:25502168..25505905hg19UCSC Ensembl
Outerchr4:25501379..25506738hg19UCSC Ensembl
Innerchr4:25111266..25115003hg18UCSC Ensembl
Outerchr4:25110477..25115836hg18UCSC Ensembl
Innerchr4:25178437..25182174hg17UCSC Ensembl
Outerchr4:25177648..25183007hg17UCSC Ensembl
Cytoband4p15.2
Allele length
AssemblyAllele length
hg385360
hg195360
hg185360
hg175360
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv10466
Supporting Variants
SamplesNA18860
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv12861
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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