A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv12829



Internal ID15837214
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:76709..118238hg38UCSC Ensembl
Outerchr6:70669..126418hg38UCSC Ensembl
Innerchr6:76709..118238hg19UCSC Ensembl
Outerchr6:70669..126418hg19UCSC Ensembl
Innerchr6:21709..63238hg18UCSC Ensembl
Outerchr6:15669..71418hg18UCSC Ensembl
Innerchr6:21709..63238hg17UCSC Ensembl
Outerchr6:15669..71418hg17UCSC Ensembl
Cytoband6p25.3
Allele length
AssemblyAllele length
hg3855750
hg1955750
hg1855750
hg1755750
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv10796
Supporting Variants
SamplesNA18572
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv12829
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer