A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv1238



Internal ID15544489
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr15:20421035..22270489hg38UCSC Ensembl
Outerchr15:20626288..22558440hg19UCSC Ensembl
Outerchr15:18886302..20059804hg18UCSC Ensembl
Outerchr15:18886302..20059804hg17UCSC Ensembl
Cytoband15q11.1
Allele length
AssemblyAllele length
hg381849455
hg191932153
hg181173503
hg171173503
Variant TypeOTHER inversion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv7260
Supporting Variants
SamplesNA19240
Known GenesCT60, CXADRP2, GOLGA6L6, GOLGA8CP, HERC2P3, LOC646214, LOC727924, NBEAP1, NF1P2, OR4M2, OR4N3P, OR4N4, POTEB, POTEB2, REREP3
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nssv1238
Frequency
Sample Size9
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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