A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv12354



Internal ID15840205
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr4:69259246..69369886hg38UCSC Ensembl
Outerchr4:69259034..69371605hg38UCSC Ensembl
Innerchr4:70124964..70235604hg19UCSC Ensembl
Outerchr4:70124752..70237323hg19UCSC Ensembl
Innerchr4:70159553..70270193hg18UCSC Ensembl
Outerchr4:70159341..70271912hg18UCSC Ensembl
Innerchr4:70305724..70416364hg17UCSC Ensembl
Outerchr4:70305512..70418083hg17UCSC Ensembl
Cytoband4q13.2
Allele length
AssemblyAllele length
hg38112572
hg19112572
hg18112572
hg17112572
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv10524
Supporting Variants
SamplesNA18975
Known GenesUGT2B28
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv12354
Frequency
Sample Size31
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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