A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv12177



Internal ID15841606
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr3:137312505..137314170hg38UCSC Ensembl
Outerchr3:137308495..137385016hg38UCSC Ensembl
Innerchr3:137031347..137033012hg19UCSC Ensembl
Outerchr3:137027337..137103858hg19UCSC Ensembl
Innerchr3:138514037..138515702hg18UCSC Ensembl
Outerchr3:138510027..138586548hg18UCSC Ensembl
Innerchr3:138514045..138515710hg17UCSC Ensembl
Outerchr3:138510035..138586556hg17UCSC Ensembl
Cytoband3q22.3
Allele length
AssemblyAllele length
hg3876522
hg1976522
hg1876522
hg1776522
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv10326
Supporting Variants
SamplesNA19132
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv12177
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer