A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv12097



Internal ID15483166
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr1:16904605..16934648hg38UCSC Ensembl
Outerchr1:16903605..16936592hg38UCSC Ensembl
Innerchr1:17231100..17261143hg19UCSC Ensembl
Outerchr1:17230100..17263087hg19UCSC Ensembl
Innerchr1:17103687..17133730hg18UCSC Ensembl
Outerchr1:17102687..17135674hg18UCSC Ensembl
Innerchr1:16976406..17006449hg17UCSC Ensembl
Outerchr1:16975406..17008393hg17UCSC Ensembl
Cytoband1p36.13
Allele length
AssemblyAllele length
hg3832988
hg1932988
hg1832988
hg1732988
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9324
Supporting Variants
SamplesNA11830
Known GenesCROCC
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv12097
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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