A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv11935



Internal ID15840967
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr4:29229021..29239839hg38UCSC Ensembl
Outerchr4:29228129..29240322hg38UCSC Ensembl
Innerchr4:29230643..29241461hg19UCSC Ensembl
Outerchr4:29229751..29241944hg19UCSC Ensembl
Innerchr4:28839741..28850559hg18UCSC Ensembl
Outerchr4:28838849..28851042hg18UCSC Ensembl
Innerchr4:28906912..28917730hg17UCSC Ensembl
Outerchr4:28906020..28918213hg17UCSC Ensembl
Cytoband4p15.1
Allele length
AssemblyAllele length
hg3812194
hg1912194
hg1812194
hg1712194
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv10471
Supporting Variants
SamplesNA18980
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv11935
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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