A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv11896



Internal ID15835664
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr4:49564077..49578475hg38UCSC Ensembl
Outerchr4:49562354..49578752hg38UCSC Ensembl
Innerchr4:49566094..49580492hg19UCSC Ensembl
Outerchr4:49564371..49580769hg19UCSC Ensembl
Innerchr4:49260851..49275249hg18UCSC Ensembl
Outerchr4:49259128..49275526hg18UCSC Ensembl
Innerchr4:49407022..49421420hg17UCSC Ensembl
Outerchr4:49405299..49421697hg17UCSC Ensembl
Cytoband4p11
Allele length
AssemblyAllele length
hg3816399
hg1916399
hg1816399
hg1716399
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv10491
Supporting Variants
SamplesNA18552
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv11896
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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