A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv11862



Internal ID15486479
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr3:46754569..46809836hg38UCSC Ensembl
Outerchr3:46753678..46810227hg38UCSC Ensembl
Innerchr3:46796059..46851326hg19UCSC Ensembl
Outerchr3:46795168..46851717hg19UCSC Ensembl
Innerchr3:46771063..46826330hg18UCSC Ensembl
Outerchr3:46770172..46826721hg18UCSC Ensembl
Innerchr3:46771063..46826330hg17UCSC Ensembl
Outerchr3:46770172..46826721hg17UCSC Ensembl
Cytoband3p21.31
Allele length
AssemblyAllele length
hg3856550
hg1956550
hg1856550
hg1756550
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv10269
Supporting Variants
SamplesNA18502
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv11862
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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