A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv11817



Internal ID15495256
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr3:134493..136207hg38UCSC Ensembl
Outerchr3:132029..136921hg38UCSC Ensembl
Innerchr3:176176..177890hg19UCSC Ensembl
Outerchr3:173712..178604hg19UCSC Ensembl
Innerchr3:151176..152890hg18UCSC Ensembl
Outerchr3:148712..153604hg18UCSC Ensembl
Innerchr3:151176..152890hg17UCSC Ensembl
Outerchr3:148712..153604hg17UCSC Ensembl
Cytoband3p26.3
Allele length
AssemblyAllele length
hg384893
hg194893
hg184893
hg174893
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv10236
Supporting Variants
SamplesNA19132
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv11817
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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