A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv11811



Internal ID15491476
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr3:134493..137828hg38UCSC Ensembl
Outerchr3:132029..138614hg38UCSC Ensembl
Innerchr3:176176..179511hg19UCSC Ensembl
Outerchr3:173712..180297hg19UCSC Ensembl
Innerchr3:151176..154511hg18UCSC Ensembl
Outerchr3:148712..155297hg18UCSC Ensembl
Innerchr3:151176..154511hg17UCSC Ensembl
Outerchr3:148712..155297hg17UCSC Ensembl
Cytoband3p26.3
Allele length
AssemblyAllele length
hg386586
hg196586
hg186586
hg176586
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv10236
Supporting Variants
SamplesNA18860
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv11811
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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