A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv11802



Internal ID15833141
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr3:26171878..26179142hg38UCSC Ensembl
Outerchr3:26171356..26179474hg38UCSC Ensembl
Innerchr3:26213369..26220633hg19UCSC Ensembl
Outerchr3:26212847..26220965hg19UCSC Ensembl
Innerchr3:26188373..26195637hg18UCSC Ensembl
Outerchr3:26187851..26195969hg18UCSC Ensembl
Innerchr3:26188373..26195637hg17UCSC Ensembl
Outerchr3:26187851..26195969hg17UCSC Ensembl
Cytoband3p24.2
Allele length
AssemblyAllele length
hg388119
hg198119
hg188119
hg178119
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv10256
Supporting Variants
SamplesNA18502
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv11802
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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