A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv1173201



Internal ID15877803
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr1:152558034..152625472hg38UCSC Ensembl
Innerchr1:152530510..152597948hg19UCSC Ensembl
Innerchr1:150797134..150864572hg18UCSC Ensembl
Cytoband1q21.3
Allele length
AssemblyAllele length
hg3867439
hg1967439
hg1867439
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv547878
Supporting Variants
SamplesHGDP01048
Known GenesLCE3A, LCE3B, LCE3C, LCE3D, LCE3E
MethodSNP array
AnalysisIllumina SNP array copy number analysis
PlatformNot reported
Comments
ReferenceCooper_et_al_2011
Pubmed ID21841781
Accession Number(s)nssv1173201
Frequency
Sample Size17421
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer