A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv1173198



Internal ID15876618
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr1:152557356..152618666hg38UCSC Ensembl
Innerchr1:152529832..152591142hg19UCSC Ensembl
Innerchr1:150796456..150857766hg18UCSC Ensembl
Cytoband1q21.3
Allele length
AssemblyAllele length
hg3861311
hg1961311
hg1861311
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv547871
Supporting Variants
SamplesHGDP00868
Known GenesLCE3B, LCE3C, LCE3D, LCE3E
MethodSNP array
AnalysisIllumina SNP array copy number analysis
PlatformNot reported
Comments
ReferenceCooper_et_al_2011
Pubmed ID21841781
Accession Number(s)nssv1173198
Frequency
Sample Size17421
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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