A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv11677



Internal ID15483557
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr4:28497..63917hg38UCSC Ensembl
Outerchr4:27767..64711hg38UCSC Ensembl
Innerchr4:28497..63809hg19UCSC Ensembl
Outerchr4:27767..64603hg19UCSC Ensembl
Innerchr4:18497..53809hg18UCSC Ensembl
Outerchr4:17767..54603hg18UCSC Ensembl
Innerchr4:18497..53809hg17UCSC Ensembl
Outerchr4:17767..54603hg17UCSC Ensembl
Cytoband4p16.3
Allele length
AssemblyAllele length
hg3836945
hg1936837
hg1836837
hg1736837
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv10409
Supporting Variants
SamplesNA11830
Known GenesZNF595, ZNF718
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv11677
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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