A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv11675



Internal ID15482523
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr4:86055426..86058723hg38UCSC Ensembl
Outerchr4:86054725..86059733hg38UCSC Ensembl
Innerchr4:86976579..86979876hg19UCSC Ensembl
Outerchr4:86975878..86980886hg19UCSC Ensembl
Innerchr4:87195603..87198900hg18UCSC Ensembl
Outerchr4:87194902..87199910hg18UCSC Ensembl
Innerchr4:87333758..87337055hg17UCSC Ensembl
Outerchr4:87333057..87338065hg17UCSC Ensembl
Cytoband4q21.3
Allele length
AssemblyAllele length
hg385009
hg195009
hg185009
hg175009
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv10529
Supporting Variants
SamplesNA10847
Known GenesMAPK10
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv11675
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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