A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv11559



Internal ID15831446
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr3:129951903..129952847hg38UCSC Ensembl
Outerchr3:129951509..129954092hg38UCSC Ensembl
Innerchr3:129670746..129671690hg19UCSC Ensembl
Outerchr3:129670352..129672935hg19UCSC Ensembl
Innerchr3:131153436..131154380hg18UCSC Ensembl
Outerchr3:131153042..131155625hg18UCSC Ensembl
Innerchr3:131153444..131154388hg17UCSC Ensembl
Outerchr3:131153050..131155633hg17UCSC Ensembl
Cytoband3q21.3
Allele length
AssemblyAllele length
hg382584
hg192584
hg182584
hg172584
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv10320
Supporting Variants
SamplesNA12740
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv11559
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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