A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv1154742



Internal ID15528368
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:52642807..52843999hg38UCSC Ensembl
Innerchr6:52507605..52708797hg19UCSC Ensembl
Innerchr6:52615564..52816756hg18UCSC Ensembl
Cytoband6p12.1
Allele length
AssemblyAllele length
hg38201193
hg19201193
hg18201193
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv603106
Supporting Variants
SamplesHGDP00628
Known GenesGSTA1, GSTA2, GSTA5, GSTA7P, LOC730101, TMEM14A
MethodSNP array
AnalysisIllumina SNP array copy number analysis
PlatformNot reported
Comments
ReferenceCooper_et_al_2011
Pubmed ID21841781
Accession Number(s)nssv1154742
Frequency
Sample Size17421
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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