A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv11536



Internal ID15835438
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr3:197630885..197665972hg38UCSC Ensembl
Outerchr3:197629408..197666416hg38UCSC Ensembl
Innerchr3:197357756..197392843hg19UCSC Ensembl
Outerchr3:197356279..197393287hg19UCSC Ensembl
Innerchr3:198842153..198877240hg18UCSC Ensembl
Outerchr3:198840676..198877684hg18UCSC Ensembl
Innerchr3:198846066..198881153hg17UCSC Ensembl
Outerchr3:198844589..198881597hg17UCSC Ensembl
Cytoband3q29
Allele length
AssemblyAllele length
hg3837009
hg1937009
hg1837009
hg1737009
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv10401
Supporting Variants
SamplesNA18552
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv11536
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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