A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv1149677



Internal ID15507279
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr17:3601921..3664167hg38UCSC Ensembl
Innerchr17:3505215..3567461hg19UCSC Ensembl
Innerchr17:3451964..3514210hg18UCSC Ensembl
Cytoband17p13.2
Allele length
AssemblyAllele length
hg3862247
hg1962247
hg1862247
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv574241
Supporting Variants
Samples1780854495_A
Known GenesCTNS, P2RX5-TAX1BP3, SHPK, TAX1BP3, TRPV1
MethodSNP array
AnalysisIllumina SNP array copy number analysis
PlatformNot reported
Comments
ReferenceCooper_et_al_2011
Pubmed ID21841781
Accession Number(s)nssv1149677
Frequency
Sample Size17421
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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