A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv11242



Internal ID15192651
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr10:106857659..112722923hg38UCSC Ensembl
Outerchr10:108617417..114482682hg19UCSC Ensembl
Outerchr10:108607407..114472672hg18UCSC Ensembl
Outerchr10:108607407..114472672hg17UCSC Ensembl
Cytoband10q25.1
Allele length
AssemblyAllele length
hg385865265
hg195865266
hg185865266
hg175865266
Variant TypeOTHER inversion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv7211
Supporting Variants
SamplesNA15510
Known GenesACSL5, ADD3, ADD3-AS1, ADRA2A, BBIP1, DUSP5, GPAM, GUCY2GP, MIR4295, MIR4680, MIR6715A, MIR6715B, MXI1, PDCD4, PDCD4-AS1, RBM20, RNU6-53P, RPL13AP6, SHOC2, SMC3, SMNDC1, SORCS1, TECTB, VTI1A, XPNPEP1, ZDHHC6
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nssv11242
Frequency
Sample Size9
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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