A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv11087



Internal ID15539621
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr1:152577480..152635996hg38UCSC Ensembl
Outerchr1:152549956..152608472hg19UCSC Ensembl
Outerchr1:150816580..150875096hg18UCSC Ensembl
Outerchr1:149363029..149421545hg17UCSC Ensembl
Cytoband1q21.3
Allele length
AssemblyAllele length
hg3858517
hg1958517
hg1858517
hg1758517
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag1
Merged StatusS
Merged Variantsnsv2888
Supporting Variants
SamplesNA15510
Known GenesLCE3A, LCE3B, LCE3C, LCE3D
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nssv11087
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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