A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv10999



Internal ID15192901
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr19:47891351..47948361hg38UCSC Ensembl
Outerchr19:48394608..48451618hg19UCSC Ensembl
Outerchr19:53086420..53143430hg18UCSC Ensembl
Outerchr19:53086420..53143430hg17UCSC Ensembl
Cytoband19q13.32
Allele length
AssemblyAllele length
hg3857011
hg1957011
hg1857011
hg1757011
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag1
Merged StatusS
Merged Variantsnsv2513
Supporting Variants
SamplesNA15510
Known GenesSNAR-A1, SNAR-A10, SNAR-A11, SNAR-A12, SNAR-A13, SNAR-A14, SNAR-A2, SNAR-A3, SNAR-A4, SNAR-A5, SNAR-A6, SNAR-A7, SNAR-A8, SNAR-A9, SNAR-C1, SNAR-C2, SNAR-C4, SNAR-C5
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nssv10999
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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