A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv10959



Internal ID15192861
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr16:70165549..74387235hg38UCSC Ensembl
Outerchr16:70199452..74421133hg19UCSC Ensembl
Outerchr16:68756953..72978634hg18UCSC Ensembl
Outerchr16:68756953..72978634hg17UCSC Ensembl
Cytoband16q22.1
Allele length
AssemblyAllele length
hg384221687
hg194221682
hg184221682
hg174221682
Variant TypeOTHER inversion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv7285
Supporting Variants
SamplesNA15510
Known GenesAARS, AP1G1, ATXN1L, C16orf47, CALB2, CHST4, CLEC18C, CMTR2, COG4, DDX19A, DDX19B, DHODH, DHX38, EXOSC6, FUK, HCCAT5, HP, HPR, HYDIN, HYDIN2, IL34, IST1, LOC100132529, LOC100506060, LOC100506083, LOC100506172, LOC101928035, LOC283922, MARVELD3, MTSS1L, PHLPP2, PKD1L3, PMFBP1, PSMD7, SF3B3, SNORA70D, SNORD111, SNORD111B, SNORD71, ST3GAL2, TAT, TXNL4B, VAC14, VAC14-AS1, ZFHX3, ZNF19, ZNF23, ZNF821
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nssv10959
Frequency
Sample Size9
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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