A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv10899



Internal ID15192801
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr1:25246527..25345647hg38UCSC Ensembl
Outerchr1:25573018..25672138hg19UCSC Ensembl
Outerchr1:25445605..25544725hg18UCSC Ensembl
Outerchr1:25318324..25417454hg17UCSC Ensembl
Cytoband1p36.11
Allele length
AssemblyAllele length
hg3899121
hg1999121
hg1899121
hg1799131
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag1
Merged StatusS
Merged Variantsnsv7298
Supporting Variants
SamplesNA15510
Known GenesC1orf63, RHD, TMEM50A
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nssv10899
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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