A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv10883



Internal ID15192785
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr11:1878156..1919990hg38UCSC Ensembl
Outerchr11:1899386..1941220hg19UCSC Ensembl
Outerchr11:1855962..1897796hg18UCSC Ensembl
Outerchr11:1855962..1897796hg17UCSC Ensembl
Cytoband11p15.5
Allele length
AssemblyAllele length
hg3841835
hg1941835
hg1841835
hg1741835
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag1
Merged StatusS
Merged Variantsnsv7643
Supporting Variants
SamplesNA15510
Known GenesLSP1, TNNT3
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nssv10883
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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