A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv1056626



Internal ID15909812
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:32642282..32811865hg38UCSC Ensembl
Innerchr6:32610059..32779642hg19UCSC Ensembl
Innerchr6:32718037..32887620hg18UCSC Ensembl
Cytoband6p21.32
Allele length
AssemblyAllele length
hg38169584
hg19169584
hg18169584
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv602740
Supporting Variants
Samples
Known GenesHLA-DQA1, HLA-DQA2, HLA-DQB1, HLA-DQB2
MethodSNP array
AnalysisIllumina SNP array copy number analysis
PlatformNot reported
Comments
ReferenceCooper_et_al_2011
Pubmed ID21841781
Accession Number(s)nssv1056626
Frequency
Sample Size17421
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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