A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv1055290



Internal ID15908476
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:32506157..32689557hg38UCSC Ensembl
Innerchr6:32473934..32657334hg19UCSC Ensembl
Innerchr6:32581912..32765312hg18UCSC Ensembl
Cytoband6p21.32
Allele length
AssemblyAllele length
hg38183401
hg19183401
hg18183401
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv602379
Supporting Variants
Samples
Known GenesHLA-DQA1, HLA-DQB1, HLA-DRB1, HLA-DRB5, HLA-DRB6
MethodSNP array
AnalysisIllumina SNP array copy number analysis
PlatformNot reported
Comments
ReferenceCooper_et_al_2011
Pubmed ID21841781
Accession Number(s)nssv1055290
Frequency
Sample Size17421
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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