A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv1055229



Internal ID15908415
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:32505132..32659936hg38UCSC Ensembl
Innerchr6:32472909..32627713hg19UCSC Ensembl
Innerchr6:32580887..32735691hg18UCSC Ensembl
Cytoband6p21.32
Allele length
AssemblyAllele length
hg38154805
hg19154805
hg18154805
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv602357
Supporting Variants
Samples
Known GenesHLA-DQA1, HLA-DQB1, HLA-DRB1, HLA-DRB5, HLA-DRB6
MethodSNP array
AnalysisIllumina SNP array copy number analysis
PlatformNot reported
Comments
ReferenceCooper_et_al_2011
Pubmed ID21841781
Accession Number(s)nssv1055229
Frequency
Sample Size17421
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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