A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv1054912



Internal ID15908098
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:32491135..32655167hg38UCSC Ensembl
Innerchr6:32458912..32622944hg19UCSC Ensembl
Innerchr6:32566890..32730922hg18UCSC Ensembl
Cytoband6p21.32
Allele length
AssemblyAllele length
hg38164033
hg19164033
hg18164033
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv602276
Supporting Variants
Samples
Known GenesHLA-DQA1, HLA-DRB1, HLA-DRB5, HLA-DRB6
MethodSNP array
AnalysisIllumina SNP array copy number analysis
PlatformNot reported
Comments
ReferenceCooper_et_al_2011
Pubmed ID21841781
Accession Number(s)nssv1054912
Frequency
Sample Size17421
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer