A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv1042254



Internal ID15548754
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr5:140851652..140856513hg38UCSC Ensembl
Innerchr5:140231237..140236098hg19UCSC Ensembl
Innerchr5:140211421..140216282hg18UCSC Ensembl
Cytoband5q31.3
Allele length
AssemblyAllele length
hg384862
hg194862
hg184862
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv599874
Supporting Variants
Samples
Known GenesPCDHA1, PCDHA10, PCDHA2, PCDHA3, PCDHA4, PCDHA5, PCDHA6, PCDHA7, PCDHA8, PCDHA9
MethodSNP array
AnalysisIllumina SNP array copy number analysis
PlatformNot reported
Comments
ReferenceCooper_et_al_2011
Pubmed ID21841781
Accession Number(s)nssv1042254
Frequency
Sample Size17421
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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