A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv10394



Internal ID15542404
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr4:9324777..9395207hg38UCSC Ensembl
Outerchr4:9326503..9396933hg19UCSC Ensembl
Outerchr4:8935601..9006031hg18UCSC Ensembl
Outerchr4:9002772..9073202hg17UCSC Ensembl
Cytoband4p16.1
Allele length
AssemblyAllele length
hg3870431
hg1970431
hg1870431
hg1770431
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv4227
Supporting Variants
SamplesNA18956
Known GenesUSP17L10, USP17L11, USP17L12, USP17L13, USP17L15, USP17L17, USP17L18, USP17L19, USP17L20, USP17L21, USP17L22, USP17L24, USP17L25, USP17L26, USP17L27, USP17L28, USP17L29, USP17L30, USP17L5, USP17L6P, USP17L9P
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nssv10394
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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