A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv10325



Internal ID15195787
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr22:38959694..38995687hg38UCSC Ensembl
Outerchr22:39355699..39391692hg19UCSC Ensembl
Outerchr22:37685645..37721638hg18UCSC Ensembl
Outerchr22:37680199..37716192hg17UCSC Ensembl
Cytoband22q13.1
Allele length
AssemblyAllele length
hg3835994
hg1935994
hg1835994
hg1735994
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag1
Merged StatusS
Merged Variantsnsv3627
Supporting Variants
SamplesNA18956
Known GenesAPOBEC3A, APOBEC3A_B, APOBEC3B, APOBEC3B-AS1
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nssv10325
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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