A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv10190



Internal ID15542608
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr19:42774571..43047152hg38UCSC Ensembl
Outerchr19:43278723..43551304hg19UCSC Ensembl
Outerchr19:47970563..48243144hg18UCSC Ensembl
Outerchr19:47970563..48243144hg17UCSC Ensembl
Cytoband19q13.2
Allele length
AssemblyAllele length
hg38272582
hg19272582
hg18272582
hg17272582
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag1
Merged StatusS
Merged Variantsnsv2497
Supporting Variants
SamplesNA18956
Known GenesLOC100289650, PSG1, PSG10P, PSG11, PSG6, PSG7
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nssv10190
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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