A curated catalogue of human genomic structural variation

Variant Details

Variant: esv3893739

Internal ID

18837873

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
Inner	chr3:89485227..89494527	hg38	UCSC Ensembl
Outer	chr3:89478237..89497459	hg38	UCSC Ensembl
Inner	chr3:89534377..89543677	hg19	UCSC Ensembl
Outer	chr3:89527387..89546609	hg19	UCSC Ensembl
Inner	chr3:89617067..89626367	hg18	UCSC Ensembl
Outer	chr3:89610077..89629299	hg18	UCSC Ensembl

Cytoband

3p11.1

Allele length

Assembly	Allele length
hg38	19223
hg19	19223
hg18	19223

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

M

Merged Variants

Supporting Variants

essv25781864, essv25782110, essv25782184, essv25799412, essv25779596, essv25798488, essv25799750, essv25785423, essv25786633, essv25778720, essv25785166, essv25787465, essv25799586, essv25784697, essv25798436, essv25784310, essv25798638, essv25784109, essv25780498, essv25778742, essv25801141, essv25781472, essv25798922, essv25784501, essv25800097, essv25800931, essv25801087, essv25800316, essv25786456, essv25784172, essv25787537, essv25780586, essv25783037, essv25799227, essv25781318, essv25800600, essv25787510, essv25779211, essv25778298, essv25801485, essv25783173, essv25783759, essv25784506, essv25784387, essv25785216, essv25781591, essv25780450, essv25801061, essv25781913, essv25800350, essv25780281, essv25784787, essv25799897, essv25780131, essv25784928, essv25784701, essv25787264, essv25778431, essv25778376, essv25786000, essv25783853, essv25786252, essv25781338, essv25782289, essv25798695, essv25783445, essv25783431, essv25799874, essv25800062, essv25783296, essv25786084, essv25800272, essv25787342, essv25781349, essv25787566, essv25783830, essv25800235, essv25800873, essv25778709, essv25783951, essv25781728, essv25779453, essv25779727, essv25783339, essv25800475, essv25786340, essv25780285, essv25779397, essv25787282, essv25786812, essv25783898, essv25782710, essv25799565, essv25800741, essv25784812, essv25799145, essv25799678, essv25799293, essv25784325, essv25779634, essv25801197, essv25778666, essv25782133, essv25798295, essv25783262, essv25782919, essv25784968, essv25781298, essv25784332, essv25800880, essv25783192, essv25783802, essv25782948, essv25798457, essv25798722, essv25800956, essv25800204, essv25801357, essv25782696, essv25801438, essv25780226, essv25778518, essv25783492

Samples

Known Genes

Method

SNP array

Analysis

Platform

Illumina HumanHap 610

Comments

Reference

Suktitipat_et_al_2014

Pubmed ID

Accession Number(s)

Frequency

Sample Size	3017
Observed Gain	0
Observed Loss	123
Observed Complex	0
Frequency	n/a