A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3893739



Internal ID18837873
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr3:89485227..89494527hg38UCSC Ensembl
Outerchr3:89478237..89497459hg38UCSC Ensembl
Innerchr3:89534377..89543677hg19UCSC Ensembl
Outerchr3:89527387..89546609hg19UCSC Ensembl
Innerchr3:89617067..89626367hg18UCSC Ensembl
Outerchr3:89610077..89629299hg18UCSC Ensembl
Cytoband3p11.1
Allele length
AssemblyAllele length
hg3819223
hg1919223
hg1819223
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv25784387, essv25785166, essv25798488, essv25783431, essv25801485, essv25783759, essv25783262, essv25800931, essv25800475, essv25801357, essv25778666, essv25800097, essv25801087, essv25798436, essv25786812, essv25779727, essv25778431, essv25787282, essv25782110, essv25781472, essv25779596, essv25783173, essv25782919, essv25780586, essv25799874, essv25798922, essv25782948, essv25784310, essv25799565, essv25779453, essv25801438, essv25783192, essv25784697, essv25784172, essv25785423, essv25782696, essv25782133, essv25781913, essv25787342, essv25783830, essv25787537, essv25786340, essv25800880, essv25781728, essv25783898, essv25799227, essv25798638, essv25779634, essv25800316, essv25781864, essv25778376, essv25798695, essv25780285, essv25784787, essv25800873, essv25783445, essv25798722, essv25786000, essv25799145, essv25801061, essv25778742, essv25784325, essv25786633, essv25783853, essv25783296, essv25780498, essv25780226, essv25799412, essv25783951, essv25782184, essv25784701, essv25780450, essv25779211, essv25778709, essv25800600, essv25800741, essv25799678, essv25798457, essv25800062, essv25778518, essv25786084, essv25781349, essv25781318, essv25798295, essv25784109, essv25800272, essv25787566, essv25783037, essv25799750, essv25786456, essv25787465, essv25784332, essv25784812, essv25784928, essv25800956, essv25787264, essv25780281, essv25782289, essv25781591, essv25778720, essv25783492, essv25799586, essv25800350, essv25801141, essv25778298, essv25780131, essv25801197, essv25785216, essv25781298, essv25784506, essv25784501, essv25799897, essv25781338, essv25799293, essv25800235, essv25783339, essv25786252, essv25782710, essv25779397, essv25784968, essv25783802, essv25787510, essv25800204
Samples
Known GenesEPHA3
MethodSNP array
Analysis
PlatformIllumina HumanHap 610
Comments
ReferenceSuktitipat_et_al_2014
Pubmed ID25118596
Accession Number(s)esv3893739
Frequency
Sample Size3017
Observed Gain0
Observed Loss123
Observed Complex0
Frequencyn/a


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