A curated catalogue of human genomic structural variation

Variant Details

Variant: esv3893682

Internal ID

19184502

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
Inner	chr3:37939410..37944758	hg38	UCSC Ensembl
Outer	chr3:37936223..37944758	hg38	UCSC Ensembl
Inner	chr3:37980901..37986249	hg19	UCSC Ensembl
Outer	chr3:37977714..37986249	hg19	UCSC Ensembl
Inner	chr3:37955905..37961253	hg18	UCSC Ensembl
Outer	chr3:37952718..37961253	hg18	UCSC Ensembl

Cytoband

3p22.2

Allele length

Assembly	Allele length
hg38	8536
hg19	8536
hg18	8536

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

M

Merged Variants

Supporting Variants

essv25779146, essv25797656, essv25782109, essv25800748, essv25780217, essv25799417, essv25781333, essv25796492, essv25796893, essv25786844, essv25783598, essv25779540, essv25781214, essv25796397, essv25786901, essv25800459, essv25798307, essv25781920, essv25800507, essv25786509, essv25782610, essv25799007, essv25779396, essv25778683, essv25795837, essv25796583, essv25800546, essv25784257, essv25798938, essv25785882, essv25786703, essv25799324, essv25778956, essv25782730, essv25780115, essv25781510, essv25781997, essv25798206, essv25784434, essv25778387, essv25797284, essv25798689, essv25781181, essv25778950, essv25785384, essv25800821, essv25796947, essv25779734, essv25785366, essv25780167, essv25782386, essv25781525, essv25780638, essv25781251, essv25800894, essv25786670, essv25778766, essv25787565, essv25798994, essv25800902, essv25786445, essv25796750, essv25781964, essv25798731, essv25800174, essv25785186, essv25787281, essv25779512, essv25778695, essv25798643, essv25785309, essv25798014, essv25795888, essv25786736, essv25801124, essv25782490, essv25782146, essv25783383, essv25782211, essv25780122, essv25781089, essv25785373, essv25780491, essv25781533, essv25797934, essv25785105, essv25799978, essv25798373, essv25783205, essv25783237, essv25781452, essv25786452, essv25780713, essv25780289, essv25797828, essv25781208, essv25797969, essv25786466, essv25780972, essv25801504, essv25778589, essv25786661, essv25781974, essv25798987, essv25784121, essv25800634, essv25786006, essv25781095, essv25784514, essv25799317, essv25787406, essv25780265, essv25783330, essv25782649, essv25796303, essv25782256, essv25800599, essv25800682, essv25783024, essv25787536, essv25797830, essv25778499, essv25796816, essv25778868, essv25797025, essv25785747, essv25801386, essv25782200, essv25799657, essv25796011, essv25780361, essv25798278, essv25794114, essv25787318

Samples

Known Genes

Method

SNP array

Analysis

Platform

Illumina HumanHap 610
Illumina Human OmniExpress

Comments

Reference

Suktitipat_et_al_2014

Pubmed ID

Accession Number(s)

Frequency

Sample Size	3017
Observed Gain	0
Observed Loss	134
Observed Complex	0
Frequency	n/a