A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3891705



Internal ID18839415
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr9:104391828..106660921hg38UCSC Ensembl
Outerchr9:104391828..106660921hg38UCSC Ensembl
Innerchr9:107154109..109423202hg19UCSC Ensembl
Outerchr9:107154109..109423202hg19UCSC Ensembl
Innerchr9:106193930..108463023hg18UCSC Ensembl
Outerchr9:106193930..108463023hg18UCSC Ensembl
Cytoband9q31.1
Allele length
AssemblyAllele length
hg382269094
hg192269094
hg182269094
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv25797771
Samples
Known GenesABCA1, FKTN, FSD1L, LOC100996590, LOC286367, MIR8081, NIPSNAP3A, NIPSNAP3B, OR13C2, OR13C3, OR13C4, OR13C5, OR13C8, OR13C9, OR13D1, OR13F1, SLC44A1, TAL2, TMEM38B
MethodSNP array
Analysis
PlatformIllumina Human OmniExpress
Comments
ReferenceSuktitipat_et_al_2014
Pubmed ID25118596
Accession Number(s)esv3891705
Frequency
Sample Size3017
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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