A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3687778



Internal ID19405786
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr7:22494438..22494438hg38UCSC Ensembl
chr7:22534057..22534057hg19UCSC Ensembl
Cytoband7p15.3
Allele length
AssemblyAllele length
hg3856
hg1956
Variant TypeCNV insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv16472078
Samples
Known GenesSTEAP1B
MethodSequencing
Analysisde novo assemblies produced from SoapDenovo2 were aligned to GRC37 using LAST and input into SoapAsmVar for population-wide structural variation detection. The method is described in the publication
PlatformIllumina HiSeq 2000
Comments
ReferenceBesenbacher_et_al_2015
Pubmed ID25597990
Accession Number(s)esv3687778
Frequency
Sample Size20
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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