A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3687313



Internal ID19405321
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr6:154778809..154778809hg38UCSC Ensembl
chr6:155099943..155099943hg19UCSC Ensembl
Cytoband6q25.2
Allele length
AssemblyAllele length
hg3854
hg1954
Variant TypeCNV insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv16471659
Samples
Known GenesSCAF8
MethodSequencing
Analysisde novo assemblies produced from SoapDenovo2 were aligned to GRC37 using LAST and input into SoapAsmVar for population-wide structural variation detection. The method is described in the publication
PlatformIllumina HiSeq 2000
Comments
ReferenceBesenbacher_et_al_2015
Pubmed ID25597990
Accession Number(s)esv3687313
Frequency
Sample Size20
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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