A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3686962



Internal ID19404970
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr6:106732916..106732916hg38UCSC Ensembl
chr6:107180791..107180791hg19UCSC Ensembl
Cytoband6q21
Allele length
AssemblyAllele length
hg3897
hg1997
Variant TypeCNV insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv16471342
Samples
Known GenesLOC100422737
MethodSequencing
Analysisde novo assemblies produced from SoapDenovo2 were aligned to GRC37 using LAST and input into SoapAsmVar for population-wide structural variation detection. The method is described in the publication
PlatformIllumina HiSeq 2000
Comments
ReferenceBesenbacher_et_al_2015
Pubmed ID25597990
Accession Number(s)esv3686962
Frequency
Sample Size20
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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