A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3686582



Internal ID19404590
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr9:111918742..111918826hg38UCSC Ensembl
chr9:114681022..114681106hg19UCSC Ensembl
Cytoband9q31.3
Allele length
AssemblyAllele length
hg3885
hg1985
Variant TypeOTHER complex
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv16464071
Samples
Known GenesUGCG
MethodSequencing
Analysisde novo assemblies produced from SoapDenovo2 were aligned to GRC37 using LAST and input into SoapAsmVar for population-wide structural variation detection. The method is described in the publication
PlatformIllumina HiSeq 2000
Comments
ReferenceBesenbacher_et_al_2015
Pubmed ID25597990
Accession Number(s)esv3686582
Frequency
Sample Size20
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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