A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3686578



Internal ID19404586
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr6:52482355..52482355hg38UCSC Ensembl
chr6:52347153..52347153hg19UCSC Ensembl
Cytoband6p12.2
Allele length
AssemblyAllele length
hg3852
hg1952
Variant TypeCNV insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv16470998
Samples
Known GenesEFHC1
MethodSequencing
Analysisde novo assemblies produced from SoapDenovo2 were aligned to GRC37 using LAST and input into SoapAsmVar for population-wide structural variation detection. The method is described in the publication
PlatformIllumina HiSeq 2000
Comments
ReferenceBesenbacher_et_al_2015
Pubmed ID25597990
Accession Number(s)esv3686578
Frequency
Sample Size20
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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