A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3683860



Internal ID19401868
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr2:2786258..2786433hg38UCSC Ensembl
chr2:2790030..2790205hg19UCSC Ensembl
Cytoband2p25.3
Allele length
AssemblyAllele length
hg38176
hg19176
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv16463826
Samples
Known Genes
MethodSequencing
Analysisde novo assemblies produced from SoapDenovo2 were aligned to GRC37 using LAST and input into SoapAsmVar for population-wide structural variation detection. The method is described in the publication
PlatformIllumina HiSeq 2000
Comments
ReferenceBesenbacher_et_al_2015
Pubmed ID25597990
Accession Number(s)esv3683860
Frequency
Sample Size20
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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