A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3682419



Internal ID19400427
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr2:142677036..142677375hg38UCSC Ensembl
chr2:143434605..143434944hg19UCSC Ensembl
Cytoband2q22.2
Allele length
AssemblyAllele length
hg38340
hg19340
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv16467309
Samples
Known Genes
MethodSequencing
Analysisde novo assemblies produced from SoapDenovo2 were aligned to GRC37 using LAST and input into SoapAsmVar for population-wide structural variation detection. The method is described in the publication
PlatformIllumina HiSeq 2000
Comments
ReferenceBesenbacher_et_al_2015
Pubmed ID25597990
Accession Number(s)esv3682419
Frequency
Sample Size20
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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