A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3681069



Internal ID19052391
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr12:102848149..102848250hg38UCSC Ensembl
chr12:103241927..103242028hg19UCSC Ensembl
Cytoband12q23.2
Allele length
AssemblyAllele length
hg38102
hg19102
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv16502167
Samples
Known GenesPAH
MethodSequencing
Analysisde novo assemblies produced from SoapDenovo2 were aligned to GRC37 using LAST and input into SoapAsmVar for population-wide structural variation detection. The method is described in the publication
PlatformIllumina HiSeq 2000
Comments
ReferenceBesenbacher_et_al_2015
Pubmed ID25597990
Accession Number(s)esv3681069
Frequency
Sample Size20
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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