A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3679544



Internal ID19397552
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr10:68512339..68512662hg38UCSC Ensembl
chr10:70272096..70272419hg19UCSC Ensembl
Cytoband10q21.3
Allele length
AssemblyAllele length
hg38324
hg19324
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv16500794
Samples
Known GenesSLC25A16
MethodSequencing
Analysisde novo assemblies produced from SoapDenovo2 were aligned to GRC37 using LAST and input into SoapAsmVar for population-wide structural variation detection. The method is described in the publication
PlatformIllumina HiSeq 2000
Comments
ReferenceBesenbacher_et_al_2015
Pubmed ID25597990
Accession Number(s)esv3679544
Frequency
Sample Size20
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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