A curated catalogue of human genomic structural variation




Variant Details

Variant: esv3679288



Internal ID19397296
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr10:11885373..11885530hg38UCSC Ensembl
chr10:11927372..11927529hg19UCSC Ensembl
Cytoband10p14
Allele length
AssemblyAllele length
hg38158
hg19158
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv16500563
Samples
Known GenesPROSER2-AS1
MethodSequencing
Analysisde novo assemblies produced from SoapDenovo2 were aligned to GRC37 using LAST and input into SoapAsmVar for population-wide structural variation detection. The method is described in the publication
PlatformIllumina HiSeq 2000
Comments
ReferenceBesenbacher_et_al_2015
Pubmed ID25597990
Accession Number(s)esv3679288
Frequency
Sample Size20
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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